connector - Streamlining Data Access in Clinical Research
Provides a consistent interface for connecting R to various data sources including file systems and databases. Designed for clinical research, 'connector' streamlines access to 'ADAM', 'SDTM' for example. It helps to deal with multiple data formats through a standardized API and centralized configuration.
Last updated
8.84 score 20 stars 3 dependents 21 scripts 289 downloads
whirl - Log Execution of Scripts
Logging of scripts suitable for clinical trials using 'Quarto' to create nice human readable logs. 'whirl' enables execution of scripts in batch, while simultaneously creating logs for the execution of each script, and providing an overview summary log of the entire batch execution.
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quarto
7.30 score 19 stars 12 scripts 216 downloads
mighty.metadata - Manage 'CDISC' 'ADaM' Dataset Specifications in 'YAML' Format
Load, validate, and manipulate Clinical Data Interchange Standards Consortium ('CDISC') Analysis Data Model ('ADaM') dataset metadata stored as 'YAML' files. Metadata files are validated against a JSON schema. Provides functions to inspect and modify columns, parameters, and row-level operations within and across 'ADaM' domains. Designed for use with the 'mighty' framework.
Last updated
6.38 score 1 stars 4 scripts 278 downloads
connector.databricks - Expand 'connector' Package for 'Databricks' Tables and Volumes
Expands the 'connector' <https://github.com/NovoNordisk-OpenSource/connector> package and provides a convenient interface for accessing and interacting with 'Databricks' <https://www.databricks.com> volumes and tables directly from R.
Last updated
6.38 score 5 stars 5 scripts 529 downloads
S7schema - 'S7' Framework for Schema-Validated YAML Configuration
Provides a generic framework for working with YAML (YAML Ain't Markup Language) configuration files. Uses 'ajv' (Another JSON Schema Validator) via 'V8' to validate configurations against JSON Schema definitions. Configuration objects inherit from 'S7' classes and base lists, supporting downstream extension through custom classes and methods.
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6.03 score 3 stars 1 dependents 5 scripts 508 downloads
zephyr - Structured Messages and Options
Provides a structured framework for consistent user communication and configuration management for package developers.
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6.02 score 5 stars 7 dependents 2 scripts 626 downloads
postcard - Estimating Marginal Effects with Prognostic Covariate Adjustment
Conduct power analyses and inference of marginal effects. Uses plug-in estimation and influence functions to perform robust inference, optionally leveraging historical data to increase precision with prognostic covariate adjustment. The methods are described in Højbjerre-Frandsen et al. (2025) <doi:10.48550/arXiv.2503.22284>.
Last updated
5.02 score 1 stars 10 scripts 187 downloads
mighty.component - Mighty Components for ADaM Generation
Components to be used inside the 'mighty' framework for generation of ADaM programs.
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3.95 score 1 stars 2 scripts
