Package: mighty.metadata 0.1.0.9018

Aksel Thomsen

mighty.metadata: Manage 'CDISC' 'ADaM' Dataset Specifications in 'YAML' Format

Load, validate, and manipulate Clinical Data Interchange Standards Consortium ('CDISC') Analysis Data Model ('ADaM') dataset metadata stored as 'YAML' files. Metadata files are validated against a JSON schema. Provides functions to inspect and modify columns, parameters, and row-level operations within and across 'ADaM' domains. Designed for use with the 'mighty' framework.

Authors:Aksel Thomsen [aut, cre], Ari Siggaard Knoph [aut], Matthew Phelps [aut], Giulia Pais [aut], Katarzyna Graczyk [aut], Michael Hedegaard Thomsen [aut], Novo Nordisk A/S [cph]

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manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
mighty.metadata/json (API)

# Install 'mighty.metadata' in R:
install.packages('mighty.metadata', repos = c('https://novonordisk-opensource.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/novonordisk-opensource/mighty.metadata/issues

Pkgdown/docs site:https://novonordisk-opensource.github.io

On CRAN:

Conda:

7.54 score 2 stars 1 packages 4 scripts 345 downloads 54 exports 22 dependencies

Last updated from:d1ba96024e. Checks:7 ERROR, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develERROR252
source / vignettesOK212
linux-releaseERROR279
macos-releaseERROR250
macos-oldrelERROR285
windows-develERROR263
windows-releaseERROR324
windows-oldrelERROR310
wasm-releaseOK95

Exports:add_codelistadd_codelist_valuesadd_columnadd_documentadd_parameteradd_rowcheck_codelist_referencescreate_mdcreate_md_colcreate_md_paramcreate_md_tablecreate_md_valuesextend_codelist_valuesfilter_domainslist_codelistslist_columnslist_documentslist_parameterslist_rowsmighty_codelistsmighty_configmighty_documentsmighty_domainmighty_studymove_codelist_valuemove_columnmove_parametermove_rowpopulate_corepopulate_sparseremove_codelistremove_codelist_valueremove_columnsremove_documentsremove_parametersremove_rowsresolve_includesresolve_subsetsrestore_codelist_valuesselect_codelistselect_columnselect_documentselect_parameterselect_rowstudy_configsubset_codelist_valuesupdate_codelistupdate_codelist_valueupdate_columnupdate_documentupdate_parameterupdate_rowvalidatewrite_config

Dependencies:clidplyrgenericsgluejsonlitelifecyclemagrittrpillarpkgconfigpurrrQuickJSRR6rlangS7S7schematibbletidyselectutf8vctrswithryamlzephyr

Codelists specifications
Operation groups | Example
Rendered fromcodelists-schema.Rmdusingknitr::rmarkdown

Last update: 2026-10-15
Started: 2026-10-15

Getting Started
The YAML Specification Format | Working with a Single Domain | Loading and Inspecting | Modifying Columns | Schema Validation | Modifying Parameters | Rows | Saving Changes | Working with a Study | Loading a Study | Populating Core Variables | Populating Predecessor Metadata | The Complete Study Pipeline | Saving a Study | Conditional Metadata | Creating Flat Metadata Tables | Next Steps
Rendered frommighty-metadata.Rmdusingknitr::rmarkdown

Last update: 2026-10-13
Started: 2026-04-08

Study specifications
Standards and terminology
Rendered fromstudy-schema.Rmdusingknitr::rmarkdown

Last update: 2026-09-25
Started: 2026-04-08

Mighty specifications
Rendered frommighty-schema.Rmdusingknitr::rmarkdown

Last update: 2026-04-10
Started: 2026-04-10

ADaM specifications
Rendered fromadam-schema.Rmdusingknitr::rmarkdown

Last update: 2026-02-03
Started: 2026-02-03

Readme and manuals

Help Manual

Help pageTopics
Mighty Codelistsadd_codelist add_codelist_values check_codelist_references codelists extend_codelist_values list_codelists mighty_codelists move_codelist_value remove_codelist remove_codelist_value restore_codelist_values select_codelist subset_codelist_values update_codelist update_codelist_value
Update columns in your metadataadd_column columns list_columns move_column remove_columns select_column update_column
Create All Metadata Data Setscreate_md
Create Metadata Column Tablecreate_md_col
Create Metadata Parameter Tablecreate_md_param
Create Metadata Dataset Tablecreate_md_table
Create Metadata Value Tablecreate_md_values
Mighty Documentsadd_document documents list_documents mighty_documents remove_documents select_document update_document
Filter domains in a studyfilter_domains
Mighty Configmighty_config
Mighty Domainmighty_domain
Mighty Studymighty_study
Options for mighty.metadatamighty.metadata-options
Update parameters in your metadataadd_parameter list_parameters move_parameter parameters remove_parameters select_parameter update_parameter
Populate Core Variablespopulate_core
Populate Predecessor Metadatapopulate_sparse
Resolve conditional metadata itemsresolve_includes
Resolve row subsetsresolve_subsets
Update rows in your metadataadd_row list_rows move_row remove_rows rows select_row update_row
Study Configstudy_config
Write a mighty object to YAMLwrite_config write_config,mighty.metadata::mighty_study-method